CDS

Accession Number TCMCG051C11762
gbkey CDS
Protein Id XP_024453955.1
Location complement(join(17885010..17885132,17885308..17885386,17885668..17885814,17885900..17885954,17886042..17886149,17886380..17886395,17886830..17886921,17886974..17887008,17887972..17888063,17888167..17888217,17888375..17888516,17888603..17888827,17889133..17889161))
Gene LOC7481207
GeneID 7481207
Organism Populus trichocarpa

Protein

Length 397aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024598187.1
Definition sphingosine-1-phosphate lyase isoform X3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category E
Description Sphingosine-1-phosphate
KEGG_TC -
KEGG_Module M00100        [VIEW IN KEGG]
KEGG_Reaction R02464        [VIEW IN KEGG]
R06516        [VIEW IN KEGG]
KEGG_rclass RC00264        [VIEW IN KEGG]
RC00721        [VIEW IN KEGG]
RC01266        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01634        [VIEW IN KEGG]
EC 4.1.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00600        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04071        [VIEW IN KEGG]
map00600        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04071        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006643        [VIEW IN EMBL-EBI]
GO:0006665        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0030149        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046466        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACATTTTTGACATTAAGTTTAGTCAGGTTTGCACATACTAATCCACTGCATATGGACGTGTTCCAAACCATAGCACAATGTGAGGCAGAAGTGGTAGCTATGACGGCAGCACTACTTGGCAGCAAAAACAAATCTTCCGGAGGAGAAATATGCGGTAACATGACTTCAGGAGGAACTGAAAGTATATTATTGGCCGTGAAATCATCCCGTGACTATATGAAAGCTAAGAAGGGAATCAAAAGACCAGAAATGATCATACCTGAATCTGCACACTCAGCATATGACAAGGCAGCACAATATTTCAACATCAAGCTGCGGCGTGTTCCAGTAAATAAAAATTTTCAAGCTGATGTCAAAGCAATAAGACAGCAGATTAACAAGAACACTGTTTTGATTGTTGGATCTGCACCTGGGTTTCCTCATGGCATCATTGATCCTATTGAGGAGCTTGGTGAATTGGCATATAGCTATGGAATATGTTTCCATGTTGACCTTTGTCTTGGTGGCTTTGTATTGCCTTTCGCTTGTAAGCTAGGGTACCCGATTCCACCTTTTGATTTTTCTGTTAAAGGAGTAACCTCAATATCAGCGGATGTGCATAAATATGGACTGGCACCAAAAGGAACAAGTGTAGTTCTATACAGAAATCATGATATTAGAAAGCATCAATTTGTTGCTGTGACTGAGTGGTCAGGTGGGCTCTATGTCTCTCCTACTATTGCTGGAAGCAGGCCTGGAGGTTTGATTGCTGGGGCTTGGGCGGCGTTGATGGCTCTGGGGCTAGAAGGGTACCTGGAAAACACTAAAGCAATAATGGAAGTATCAAAGAGAATACAGAAAGGGATTAAAGAAATACCAGAGTTATTTATCATTGGAAGGCCAGACATGACAATTGTGGCATTTGGATCTAATGATCTAGACATATTTGAAGTCAATGATATCATGTCATCCAAAGGCTGGCATTTGAATGCATTGCAAAGACCCAACAGCATTCATATCTGCATTACCCTTCAACATGCACCCGTTGTTGAGGACTTCCTCCGGGATTTGAAGGAATCTGTACAAACTGTGAAAGAGAATCCTGGTCCAATAAATGGAGGCCTAGCTCCAATATATGGTGCTGCTGGGAAGATACCAGATAGAGGCATGGTTCAGGAATTGCTGGTGAACTACATGGACAGTACATGCTAA
Protein:  
MTFLTLSLVRFAHTNPLHMDVFQTIAQCEAEVVAMTAALLGSKNKSSGGEICGNMTSGGTESILLAVKSSRDYMKAKKGIKRPEMIIPESAHSAYDKAAQYFNIKLRRVPVNKNFQADVKAIRQQINKNTVLIVGSAPGFPHGIIDPIEELGELAYSYGICFHVDLCLGGFVLPFACKLGYPIPPFDFSVKGVTSISADVHKYGLAPKGTSVVLYRNHDIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAALMALGLEGYLENTKAIMEVSKRIQKGIKEIPELFIIGRPDMTIVAFGSNDLDIFEVNDIMSSKGWHLNALQRPNSIHICITLQHAPVVEDFLRDLKESVQTVKENPGPINGGLAPIYGAAGKIPDRGMVQELLVNYMDSTC